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Research tool·genomics·timer
TIMER2 Immune Estimation
Estimate immune cell abundance in TCGA cancer samples using TIMER-equivalent marker gene expression from cBioPortal. Returns infiltration proxies for 6 immune cell types (B cells, CD4+ T cells, CD8+ T cells, neutrophils, macrophages, dendritic cells) using canonical marker genes (CD19, CD4, CD8A, FCGR3B, CD68, ITGAX). Note: TIMER2.0/3.0 REST API is no longer public; this tool uses cBioPortal TCGA data as a proxy.
AvailableCortexa
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
JSON · 27 lines · 567 chars
Examples (1)
Default TIMER2 Immune Estimation call
Public-safe example · rate-limited
JSON input · 5 lines · 76 chars
Expected response keys: success
Identifiers
- Catalog ID
- tu_TIMER2_immune_estimation
- Tool name
- TIMER2_immune_estimation
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse