UniBind Search Datasets
Search the UniBind catalog of curated, experimentally derived direct transcription factor (TF)-DNA binding-site datasets (one dataset = one ChIP-seq experiment for one TF in one cell type/condition). Filter by TF gene symbol (tf_name), species scientific name (species, e.g. 'Homo sapiens'), cell type/tissue (cell_line), and collection ('Robust' or 'Permissive'). All filters are optional and compose. Returns a paginated list of matching datasets with their TF name, total peak count, and dataset_…
Overview
Search the UniBind catalog of curated, experimentally derived direct transcription factor (TF)-DNA binding-site datasets (one dataset = one ChIP-seq experiment for one TF in one cell type/condition). Filter by TF gene symbol (tf_name), species scientific name (species, e.g. 'Homo sapiens'), cell type/tissue (cell_line), and collection ('Robust' or 'Permissive'). All filters are optional and compose. Returns a paginated list of matching datasets with their TF name, total peak count, and dataset_id (use UniBind_get_dataset for full binding-site detail). UniBind provides motif-anchored, base-pair-resolution direct binding sites derived from ChIP-seq via the DAMO/ChIP-eat pipeline with JASPAR motifs - distinct from JASPAR/HOCOMOCO motif matrices and from ReMap raw ChIP-seq peaks. Public, no API key.
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
Examples (1)
Default UniBind Search Datasets call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_UniBind_search_datasets
- Tool name
- UniBind_search_datasets
- Added
- 2026-07-29 18:13Z
- Tags
- tooluniverse