UniProt Search Proteomes
Search the UniProt Proteome database for complete sets of proteins expressed by organisms. Proteomes represent the complete set of proteins from a fully sequenced genome. Supports searching by organism name, taxonomy ID, BUSCO completeness, proteome type (reference/representative/redundant), and more. Returns proteome IDs (e.g., UP000005640 for human), gene counts, organism info, and quality metrics. Useful for comparative genomics, finding model organism proteomes, or identifying reference pro…
Overview
Search the UniProt Proteome database for complete sets of proteins expressed by organisms. Proteomes represent the complete set of proteins from a fully sequenced genome. Supports searching by organism name, taxonomy ID, BUSCO completeness, proteome type (reference/representative/redundant), and more. Returns proteome IDs (e.g., UP000005640 for human), gene counts, organism info, and quality metrics. Useful for comparative genomics, finding model organism proteomes, or identifying reference proteomes.
Status
The most recent probe succeeded. Safe to call from the agent today.
- Last probed
- 1d ago
- Last success
- 1d ago
- Last latency
- 99ms
Schema
JSON Schema the agent (or your API call) must match.
{
"properties": {
"query": {
"description": "Search query using UniProt query syntax. Examples: 'organism_name:human', 'organism_id:9606', 'organism_name:escherichia coli', 'proteome_type:1' (reference), 'busco:complete>95.0'",
"type": "string"
},
"size": {
"default": 10,
"description": "Number of results to return (default 10, max 500)",
"type": "integer"
}
},
"required": [
"query"
],
"type": "object"
}Examples (1)
Default UniProt Search Proteomes call
{
"query": "BRCA1",
"size": 1
}Anonymous-safe example. Rate-limited; no sign-in required.
Identifiers
- Catalog ID
- tu_UniProt_search_proteomes
- Tool name
- UniProt_search_proteomes
- Added
- 2026-05-01 00:58Z
- Tags
- tooluniverse