Cortexa research tool·genomics·biostudies

Biostudies Search

Search BioStudies repository for biological studies across all collections. BioStudies is a comprehensive repository at EMBL-EBI that hosts diverse study types including genomics, transcriptomics, proteomics, imaging data, and more. Supports full-text search with pagination and sorting. HTML responses are automatically converted to Markdown using markitdown.

Livelast probed 2026-05-01 00:47Z· 6194msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 6194ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "page": {
      "default": 1,
      "description": "Page number for pagination (default: 1, 1-based)",
      "type": "integer"
    },
    "pageSize": {
      "default": 10,
      "description": "Number of results per page (default: 10, max: 100)",
      "maximum": 100,
      "type": "integer"
    },
    "query": {
      "description": "Search query (supports keywords, phrases, and Boolean operators). Use '*' for all studies.",
      "type": "string"
    },
    "sortBy": {
      "description": "Sort field (e.g., 'relevance', 'accession', 'release_date')",
      "enum": [
        "relevance",
        "accession",
        "release_date",
        "views"
      ],
      "type": "string"
    },
    "sortOrder": {
      "description": "Sort order: 'ascending' or 'descending'",
      "enum": [
        "ascending",
        "descending"
      ],
      "type": "string"
    }
  },
  "required": [],
  "type": "object"
}

Examples (1)

Default Biostudies Search call

public-safeinput

{
  "page": 1,
  "pageSize": 1,
  "query": "BRCA1"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_biostudies_search
Tool name: biostudies_search
Added: 2026-04-30 22:47Z
Tags: tooluniverse

Biostudies Search

Livelast probed 2026-05-01 00:47Z· 6194msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "page": { "default": 1, "description": "Page number for pagination (default: 1, 1-based)", "type": "integer" }, "pageSize": { "default": 10, "description": "Number of results per page (default: 10, max: 100)", "maximum": 100, "type": "integer" }, "query": { "description": "Search query (supports keywords, phrases, and Boolean operators). Use '*' for all studies.", "type": "string" }, "sortBy": { "description": "Sort field (e.g., 'relevance', 'accession', 'release_date')", "enum": [ "relevance", "accession", "release_date", "views" ], "type": "string" }, "sortOrder": { "description": "Sort order: 'ascending' or 'descending'", "enum": [ "ascending", "descending" ], "type": "string" } }, "required": [], "type": "object" }