Biostudies Search
Search BioStudies repository for biological studies across all collections. BioStudies is a comprehensive repository at EMBL-EBI that hosts diverse study types including genomics, transcriptomics, proteomics, imaging data, and more. Supports full-text search with pagination and sorting. HTML responses are automatically converted to Markdown using markitdown. Note: common biomedical phrases are frequently dominated by 'S-EPMC*' hits (full-text literature indexed via the EuropePMC collection) rat…
Overview
Search BioStudies repository for biological studies across all collections. BioStudies is a comprehensive repository at EMBL-EBI that hosts diverse study types including genomics, transcriptomics, proteomics, imaging data, and more. Supports full-text search with pagination and sorting. HTML responses are automatically converted to Markdown using markitdown. Note: common biomedical phrases are frequently dominated by 'S-EPMC*' hits (full-text literature indexed via the EuropePMC collection) rather than actual datasets -- to search datasets specifically (e.g. ArrayExpress expression data), use biostudies_search_by_collection with collection='arrayexpress' instead.
Schema
JSON Schema the agent (or your API call) must match.
View JSON schemaExpandCollapse
Examples (1)
Default Biostudies Search call
Public-safe example · rate-limited
Identifiers
- Catalog ID
- tu_biostudies_search
- Tool name
- biostudies_search
- Added
- 2026-04-30 22:47Z
- Tags
- tooluniverse