Cortexa research tool·structure·biostudies

Biostudies Search By Collection

Search BioStudies by specific collection (e.g., ArrayExpress, BioImages, EuropePMC). Collections are curated datasets within BioStudies that focus on specific data types or domains. HTML responses are automatically converted to Markdown.

Livelast probed 2026-05-01 01:00Z· 4778msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 4778ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "collection": {
      "description": "Collection name (e.g., 'arrayexpress', 'bioimages', 'biomodels')",
      "enum": [
        "arrayexpress",
        "bioimages",
        "biomodels",
        "europepmc"
      ],
      "type": "string"
    },
    "page": {
      "default": 1,
      "description": "Page number (default: 1)",
      "type": "integer"
    },
    "pageSize": {
      "default": 10,
      "description": "Number of results per page (default: 10, max: 100)",
      "maximum": 100,
      "type": "integer"
    },
    "query": {
      "description": "Search query within the collection",
      "type": "string"
    }
  },
  "required": [
    "collection"
  ],
  "type": "object"
}

Examples (1)

Default Biostudies Search By Collection call

public-safeinput

{
  "collection": "",
  "page": 1,
  "pageSize": 1,
  "query": "BRCA1"
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_biostudies_search_by_collection
Tool name: biostudies_search_by_collection
Added: 2026-05-01 00:58Z
Tags: tooluniverse

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "collection": { "description": "Collection name (e.g., 'arrayexpress', 'bioimages', 'biomodels')", "enum": [ "arrayexpress", "bioimages", "biomodels", "europepmc" ], "type": "string" }, "page": { "default": 1, "description": "Page number (default: 1)", "type": "integer" }, "pageSize": { "default": 10, "description": "Number of results per page (default: 10, max: 100)", "maximum": 100, "type": "integer" }, "query": { "description": "Search query within the collection", "type": "string" } }, "required": [ "collection" ], "type": "object" }