Cortexa research tool·structure·ebi_search

Ebi Search With Facets

Search EBI domain with faceted filtering and returns facet information. Use facetcount to request facets (returned automatically). To filter results BY facet values, use the 'facets' parameter with format 'FACET_NAME:value' (e.g., 'TAXONOMY:9606' for human). First run ebi_search_domain to see available facet IDs in the response, or use ebi_get_domain_info. Returns search results with facet categories for advanced filtering.

Livelast probed 2026-05-01 01:00Z· 1962msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 1962ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "domain": {
      "description": "EBI domain to search (e.g., 'ensembl', 'uniprot', 'interpro')",
      "type": "string"
    },
    "facetcount": {
      "default": 10,
      "description": "Number of facet values to return per facet category (default: 10). Set to 0 to disable facet return.",
      "type": "integer"
    },
    "facets": {
      "description": "Optional filter for results using facet values in format 'FACET_NAME:value' (e.g., 'TAXONOMY:9606' for human, 'keyword_id:KW-0418' for kinase). Multiple filters can be comma-separated. IMPORTANT: This is for FILTERING results, not selecting which facets to return. Facets are returned automatically when facetcount > 0.",
      "type": "string"
    },
    "format": {
      "default": "json",
      "enum": [
        "json",
        "xml"
      ],
      "type": "string"
    },
    "query": {
      "description": "Search query string",
      "type": "string"
    },
    "size": {
      "default": 10,
      "description": "Number of results to return (default: 10)",
      "type": "integer"
    }
  },
  "required": [
    "domain",
    "query"
  ],
  "type": "object"
}

Examples (1)

Default Ebi Search With Facets call

public-safeinput

{
  "domain": "",
  "facetcount": 1,
  "query": "BRCA1",
  "size": 1
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_ebi_search_with_facets
Tool name: ebi_search_with_facets
Added: 2026-05-01 00:58Z
Tags: tooluniverse

Ebi Search With Facets

Livelast probed 2026-05-01 01:00Z· 1962msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "domain": { "description": "EBI domain to search (e.g., 'ensembl', 'uniprot', 'interpro')", "type": "string" }, "facetcount": { "default": 10, "description": "Number of facet values to return per facet category (default: 10). Set to 0 to disable facet return.", "type": "integer" }, "facets": { "description": "Optional filter for results using facet values in format 'FACET_NAME:value' (e.g., 'TAXONOMY:9606' for human, 'keyword_id:KW-0418' for kinase). Multiple filters can be comma-separated. IMPORTANT: This is for FILTERING results, not selecting which facets to return. Facets are returned automatically when facetcount > 0.", "type": "string" }, "format": { "default": "json", "enum": [ "json", "xml" ], "type": "string" }, "query": { "description": "Search query string", "type": "string" }, "size": { "default": 10, "description": "Number of results to return (default: 10)", "type": "integer" } }, "required": [ "domain", "query" ], "type": "object" }