Cortexa research tool·structure·iedb_tools

Iedb Search Epitopes

Search immune epitopes (IEDB Query API). Use this to discover epitope `structure_id` values, then use the epitope linking tools (e.g., `iedb_get_epitope_references`) to retrieve related references, MHC, antigens, etc. Tips: - Use `select` to request only a few fields (smaller + faster responses). - For advanced filtering, pass `filters` with values like `eq.123` or `ilike.*KVF*`.

Livelast probed 2026-05-01 00:47Z· 7898msCortexa

Status

The most recent probe succeeded. Safe to call from the agent today.

Last probed: 1d ago
Last success: 1d ago
Last latency: 7898ms

Schema

JSON Schema the agent (or your API call) must match.

{
  "properties": {
    "filters": {
      "additionalProperties": {
        "type": "string"
      },
      "description": "Advanced PostgREST filters mapping column -> filter expression (e.g., {\"linear_sequence\":\"ilike.*KVF*\"}).",
      "type": "object"
    },
    "limit": {
      "default": 10,
      "description": "Maximum number of rows to return.",
      "type": "integer"
    },
    "offset": {
      "default": 0,
      "description": "Pagination offset.",
      "type": "integer"
    },
    "order": {
      "description": "Optional PostgREST order clause (e.g., 'structure_id.asc').",
      "type": "string"
    },
    "select": {
      "anyOf": [
        {
          "type": "string"
        },
        {
          "items": {
            "type": "string"
          },
          "type": "array"
        }
      ],
      "description": "Optional projection list to reduce payload size. Provide a comma-separated string or an array of field names (e.g., ['structure_id','linear_sequence'])."
    },
    "sequence_contains": {
      "description": "Sequence fragment to search within `linear_sequence` using a contains match. Example: 'KVF' finds epitopes containing that motif.",
      "type": "string"
    },
    "structure_type": {
      "description": "Filter by epitope structure type. Example: 'Linear peptide'.",
      "enum": [
        "Linear peptide",
        "Discontinuous peptide",
        "Non-peptidic"
      ],
      "type": "string"
    }
  },
  "required": [],
  "type": "object"
}

Examples (1)

Default Iedb Search Epitopes call

public-safeinput

{
  "limit": 3,
  "offset": 1
}

Expected response keys: success

Anonymous-safe example. Rate-limited; no sign-in required.

Identifiers

Catalog ID: tu_iedb_search_epitopes
Tool name: iedb_search_epitopes
Added: 2026-04-30 22:47Z
Tags: tooluniverse

Iedb Search Epitopes

Livelast probed 2026-05-01 00:47Z· 7898msCortexa

Schema

JSON Schema the agent (or your API call) must match.

{ "properties": { "filters": { "additionalProperties": { "type": "string" }, "description": "Advanced PostgREST filters mapping column -> filter expression (e.g., {\"linear_sequence\":\"ilike.*KVF*\"}).", "type": "object" }, "limit": { "default": 10, "description": "Maximum number of rows to return.", "type": "integer" }, "offset": { "default": 0, "description": "Pagination offset.", "type": "integer" }, "order": { "description": "Optional PostgREST order clause (e.g., 'structure_id.asc').", "type": "string" }, "select": { "anyOf": [ { "type": "string" }, { "items": { "type": "string" }, "type": "array" } ], "description": "Optional projection list to reduce payload size. Provide a comma-separated string or an array of field names (e.g., ['structure_id','linear_sequence'])." }, "sequence_contains": { "description": "Sequence fragment to search within `linear_sequence` using a contains match. Example: 'KVF' finds epitopes containing that motif.", "type": "string" }, "structure_type": { "description": "Filter by epitope structure type. Example: 'Linear peptide'.", "enum": [ "Linear peptide", "Discontinuous peptide", "Non-peptidic" ], "type": "string" } }, "required": [], "type": "object" }